Include MSC in a custom pipeline using scikit-learn
Learn how to include Multiplicative scatter correction in a custom pipeline using scikit-learn.
Category: Partial Least Squares Regression
Diagnostic plots for linear regression
A short survey of diagnostic plots, as tools to dig deeper on the assumptions behind a regression model.
Genetic algorithm for wavelength selection using Numpy
Regression, Partial Least Squares Regression, Variable Selection
06/22/2024
A implementation of a genetic algorithm for wavelength selection using basic Numpy functions.
Wavelength selection with a genetic algorithm
Wavelength selection methods aim at choosing the spectral bands that produce the best regression or classification model. Here we introduce a genetic algorithm for wavelength selection.
Updates and additions to the PLS Regression code
Regression, Partial Least Squares Regression, Plots and Charts
04/29/2023
Updated code and additional utility scripts for PLS regression. Will keep it updated as we go.
Regression optimisation with a Pipeline
The process of developing and optimising a regression model, almost invariably requires a sequence of steps. These steps can be combined in a single predictor using the Pipeline function …
Parallel computation of loops for cross-validation analysis
Using parallel computation to speed up cross-validation analysis for large data sets.
Backward Variable Selection for PLS regression
Regression, Partial Least Squares Regression
03/13/2021
Backward Variable Selection for PLS regression is a method to discard variables that contribute poorly to the regression model. Here's a Python implementation of the method.
Bias-Variance trade-off in PLS regression
Bias-Variance trade-off refers to the optimal choice of parameters in a model in order to avoid both overfitting and underfitting. Let's look at a worked example using PLS regression.
Wavelength band selection with simulated annealing
Regression, Partial Least Squares Regression
08/15/2020
Improve the performance of a PLS method by wavelength band selection using Simulated Annealing optimisation.
Moving window PLS regression
Regression, Partial Least Squares Regression
12/07/2019
Not all wavelengths are created equals. A moving window PLS algorithm optimises the regression by discarding bands that are not useful for prediction.
K-fold and Montecarlo cross-validation vs Bootstrap: a primer
Cross-validation is a standard procedure to quantify the robustness of a regression model. Compare K-Fold, Montecarlo and Bootstrap methods and learn some neat trick in the process.
Outliers detection with PLS regression for NIR spectroscopy in Python
Not every data point is created equal. In this post we'll show how to perform outliers detection with PLS regression for NIR spectroscopy in Python.
A variable selection method for PLS in Python
Improve the quality of your PLS regression using variable selection. This tutorial will work through a variable selection method for PLS in Python.
Partial Least Squares Regression in Python
Partial Least Squares Regression, Regression
06/14/2018
Step by step tutorial on how to build a NIR calibration model using Partial Least Squares Regression in Python.